Top BSc Microbiology Colleges in Kerala 2026 – Fees, Admission, Eligibility & Placements

Kerala is a strong destination for students planning to study BSc Microbiology. The state’s rich biodiversity, expanding biotech ecosystem, and increasing focus on public health provide students with excellent opportunities to gain practical experience. The course blends classroom learning with intensive laboratory work and real-world applications in areas such as food safety, clinical testing and pharmaceutical research.

If you have completed Class 12 with a science background, this guide will help you understand the leading colleges, fee trends and programme highlights for the 2026 admission cycle. The list below draws on general information from 2025 performance indicators like accreditation status and placement outcomes.

Best Colleges for Microbiology in Kerala (2026)

Many students search online for the best colleges for microbiology in Kerala. A number of institutions stand out for their strong laboratory facilities, internship support and industry exposure. Some private universities offer advanced biotechnology labs focused on areas such as microbial genomics, while government and aided colleges under major universities are known for affordability and trusted course delivery.

These colleges generally emphasise hands-on skill development and prepare graduates for roles linked to Kerala’s fast-growing biotech and public health ecosystem.

The curated list below highlights ten recognized microbiology colleges in Kerala, considered based on accreditation background and placement performance reported in recent academic years. Students are encouraged to verify specific details from official college sources during admission.

 

Top Microbiology Colleges in Kerala – 2026

College Name Location Type Approx. Annual Fees (2025) Key Highlight
Amrita Vishwa Vidyapeetham, Amritapuri Kollam Private ₹80,000 Advanced biotechnology and microbial genomics training, with strong placement support in pharma-linked roles
St. Joseph’s College, Irinjalakuda Thrissur Aided (Govt-Affiliated) ₹45,250 Accredited with high grades; offers practical exposure through industrial microbiology internships
Mar Athanasius College Kothamangalam, Ernakulam Aided ₹52,050 Known for an active alumni network in the food testing sector
Kerala University Affiliated Colleges (e.g., Govt College for Women) Thiruvananthapuram Government ₹35,870 Admissions through central merit system; public health microbiology focus
Calicut University Affiliated Colleges (e.g., Pazhassi Raja College) Mattanur, Kannur Aided ₹25,000–₹40,000 Affordable programmes with local field work in microbial ecology
SAFI Institute of Advanced Study Malappuram Private ₹1,17,000 Practical training in clinical diagnostics, with placement support
St. Berchmans College Changanassery, Kottayam Aided ₹42,000 Active collaborations with research bodies for agricultural microbiology
Sree Narayana College Kollam Aided ₹30,000 Community-driven research in tropical infectious microorganisms
AJ College of Science and Technology Thonnakkal, Thiruvananthapuram Private ₹60,000 Equipped with modern fermentation and biotechnology labs
Sree Krishna College Guruvayur, Thrissur Aided ₹28,500 Strong environmental microbiology focus with Western Ghats field studies

These institutions are noted for their learning environment as well as programme-level strengths, including research-led teaching, field visits, or specialised biotechnology modules.

 

Why These Colleges Stand Out

  • Emphasis on laboratory-based microbiology learning

  • Industry-aligned training in areas like microbial genomics, fermentation technology and public health

  • Opportunities for internships in research centres, food testing labs, industrial microbiology units and diagnostic facilities

  • Campus-linked placement assistance in the biotechnology and pharmaceutical domains

 

Top Government Colleges for BSc Microbiology in Kerala (2026)

Students searching for top government colleges for BSc Microbiology in Kerala will find that options are limited, but they offer very good value. These colleges focus on affordable learning, public-sector readiness, and hands-on experience in state-supported research projects.

In the 2025 admission cycle, general-category cut-offs for BSc Microbiology were typically between 85% and 90% in PCB subjects, making admission competitive.

 

Leading Government / Government-Aided Colleges – 2026

College Name Location Annual Fees (2025) 2025 PCB Cutoff Unique Feature
Government College for Women Thiruvananthapuram ₹35,000 88% Collaborations with research bodies in vaccine studies
Government Arts & Science College (Calicut University Affiliate) Kozhikode ₹20,000 86% Marine-microbiology exposure with Arabian Sea proximity
Pazhassi Raja NSS College Mattanur, Kannur ₹25,000 84% Government-aided institute offering rural health-camp experience
Sree Narayana College Kollam ₹30,000 87% Coursework connected to antimicrobial resistance research

In 2025, nearly 70% of total seats in these colleges were filled through merit-based selection, with no capitation fees, which makes them suitable for students from budget-conscious families.

 

Private Microbiology Colleges in Kerala (2026): Fees and Options

Students looking for private microbiology colleges in Kerala will find that these institutions are known for larger campuses, upgraded biotechnology labs, and frequent industry tie-ups. While private colleges have fees that can be three to five times higher than government options, they often offer stronger placement support.

During 2025, the average package across many private institutes was about ₹4 LPA, especially in sectors like diagnostics, biotech production, and pharmaceutical sales. Many colleges also allocate 20–30% seats under management quota, where the fee will be higher than the standard structure.

Highlights of Private College Options

  • Top recommended picks include institutions such as Amrita and SAFI, which have strong accreditation profiles and research-linked industry connections.

  • Typical annual fees range from ₹60,000 to ₹1.88 lakh, depending on facilities and location.

  • Students scoring 75% or more in Class 12 may receive scholarships covering 20–50% of academic fees.

  • In 2025, nearly 80% of the total seats in private institutions were filled on merit before the management and NRI rounds.

Private colleges such as AJ College are working to support innovation by offering incubation centres that help students move into applied biotechnology roles, including opportunities linked to Kerala’s technology hubs such as Infopark.

 

Kerala BSc Microbiology Admission 2026 – Step-by-Step Process

Students searching for the BSc Microbiology admission process in Kerala (2026) should know that admission is mainly merit-based. The Kerala Higher Education Department runs a single-window system, allowing students to apply to multiple colleges through one online portal. There is no KEAM exam for regular BSc Microbiology seats; selection is done through Class 12 marks.

The admission window is expected to begin in May 2026, with classes scheduled to start in August 2026.

How to Apply – Step-by-Step

  1. Online Registration

    • Applications are expected from 15 May to 15 June 2026.

    • Students can apply through university portals such as:

      • keralauniversity.ac.in

      • calicutuniversity.ac.in

  2. Document Upload
    During the application, students must upload:

    • Class 12 marksheet (minimum 50% PCB)

    • Caste certificate (if applicable)

    • Migration certificate for students outside Kerala Board

  3. Allotment Rounds

    • Three allotment rounds are published based on the merit rank list.

    • Vacant seats are filled through spot admissions in August.

  4. Admission & Reporting

    • Rank list release expected on 10 July 2026.

    • Students must report to the allotted college, submit documents, and pay fees.

    • Classes are expected to begin 1 August 2026.

FYUGP (NEP 2020) Structure

Under the Four-Year Undergraduate Programme, students can exit after two years with a certificate or continue to complete the full degree.

Seat Share Information

  • Reserved-category students get a 5% relaxation in cut-offs.

  • In private colleges, around 40% seats are allotted on merit, while 60% are offered under the management quota.

 

BSc Microbiology Eligibility in Kerala (2026)

Students searching for BSc Microbiology eligibility in Kerala will find that the requirements are simple.

To apply, candidates must:

  • Pass Class 12 from the Kerala State Board or equivalent

  • Study Physics, Chemistry, and Biology (PCB) at the +2 level

  • Score at least 50% aggregate in PCB

    • SC/ST students receive 45% eligibility

  • Have English as a compulsory subject

  • Be 17 years of age or above on 1 July 2026

Important Notes

  • For merit ranking, Biology carries 50% weightage in index marks.

  • No entrance exam is needed for regular BSc Microbiology seats in Kerala.

  • Seats in government colleges are filled strictly on merit.

  • For specialised medical-related microbiology courses under KUHS, NEET scores may apply, but this does not affect standard BSc programmes offered by general universities.

This admission pathway creates an accessible route for Class 12 science students to continue into microbiology and related bioscience fields.

 

Best BSc Microbiology Colleges in Kerala with Fees (2026)

Students searching for top BSc Microbiology colleges in Kerala with fees will find several strong options that balance affordability and career outcomes. Based on 2025 figures, Kerala University–affiliated government colleges provide the most cost-effective learning experience, while private universities deliver strong placements in biotech and pharmaceutical companies.

The table below highlights leading institutions along with their annual fees, average placement packages, and overall return on investment (ROI):

College Name Type 2025 Annual Fees (INR) Average Placement (2025, LPA) ROI Score (10)
Kerala University Affiliates Government ₹35,000 3.2 9.5
St. Joseph’s College Aided ₹45,000 3.8 9.0
Amrita Vishwa Vidyapeetham Private ₹80,000 5.0 8.5
SAFI Institute Private ₹1,17,000 4.1 7.8

Government-affiliated institutions deliver the highest ROI, especially for Kerala residents, and fee structures have remained largely stable since 2024.

 

Which Is the Best College for Microbiology in Kerala (2026)

For 2026 admissions, Amrita Vishwa Vidyapeetham stands out due to its strong NAAC ratings, high-end biotechnology laboratories, and an impressive 95% employability rate as reported in 2025.

However, those looking for more affordable options without compromising academic quality may prefer Kerala University–affiliated government colleges, which offer easy merit access and low fees.

Factors to Consider

When selecting the right institution, students should evaluate:

  • Location (Thiruvananthapuram offers the strongest lab culture)

  • Faculty expertise (top colleges report 80%+ PhD faculty)

  • Research opportunities and conference participation (e.g., Kerala Science Congress)

Your choice should reflect your priorities—Amrita for research excellence and placements, or government colleges for affordability and accessibility.

 

BSc Microbiology Placements in Kerala (2026 Outlook)

If you are exploring BSc Microbiology placement trends in Kerala, results from 2025 show encouraging numbers. Around 75% of graduates secured placements across leading pharma and biotech firms. Entry-level salaries averaged ₹3.5 LPA, increasing to ₹6 LPA after a postgraduate qualification such as MSc.

Top Recruiters

  • Biocon

  • Syngene

  • Qiagen labs

  • Kerala Drugs & Pharmaceuticals

  • State Health Departments

Final-year internships are mandatory, typically involving PCR, microbiological testing, and pathogen surveillance. Demand is expected to rise in 2026 due to Kerala’s increasing focus on post-flood pathogen monitoring under the state biotechnology plan.

Many graduates also pursue further studies—including MSc at IITs or research institutes—while others directly join QC and clinical diagnostic roles.

 

Microbiology Colleges List in Kerala: Find Colleges Near You

Students searching “BSc Microbiology colleges near me in Kerala” will find strong options across most districts.

  • Northern Kerala students often prefer Calicut University affiliates, such as Pazhassi Raja NSS College in Kannur.

  • Southern Kerala students frequently choose Amrita Vishwa Vidyapeetham in Kollam, known for biotech-driven academics.

Thrissur and surrounding central-Kerala regions are well-served by popular institutions such as St. Joseph’s College, Irinjalakuda, offering strong accessibility and infrastructure.

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Showing 23 Colleges

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St. Berchmans College

Kottayam, Kerala Public 3.8

St. Berchmans College is very popular for BSc Microbiology in Kottayam, Kerala.

Courses Offered

13 Courses

Exam Accepted

CMAT

Tuition Fees Range

-/-

Accreditation

NAAC

Kannur University

Kannur, Kerala Public 2.6

Kannur University is very popular for BSc Microbiology in Kannur, Kerala.

Courses Offered

25 Courses

Exam Accepted

CAT

Tuition Fees Range

₹10 K-1.20 L

Accreditation

-/-

V.N.S College

Pathanamthitta, Kerala Private

V.N.S College is very popular for BSc Microbiology in Pathanamthitta, Kerala.

Courses Offered

5 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

Sir Syed Institute For Technical Studies

Taliparamba, Kerala Private

Sir Syed Institute For Technical Studies is very popular for BSc Microbiology in Taliparamba, Kerala.

Courses Offered

5 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

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SNGIST - Sree Narayana Guru Institute of Science and Technology is very popular for BSc Microbiology in Kochi, Kerala.

Courses Offered

7 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

M.E.S Arts and Science College

Calicut, Kerala Private 3.9

M.E.S Arts and Science College is very popular for BSc Microbiology in Calicut, Kerala.

Courses Offered

7 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

Mamo College

Kozhikode, Kerala Private

Mamo College is very popular for BSc Microbiology in Kozhikode, Kerala.

Courses Offered

5 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

NAAC

St. Thomas College of Nursing

Changanacherry, Kerala Private 2.4

St. Thomas College of Nursing is very popular for BSc Microbiology in Changanacherry, Kerala.

Courses Offered

6 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

NAAC

Gurudev Arts and Science College

Kannur, Kerala Private 3

Gurudev Arts and Science College is very popular for BSc Microbiology in Kannur, Kerala.

Courses Offered

9 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

NAAC

Sree Sankara College

Ernakulam, Kerala Private

Sree Sankara College is very popular for BSc Microbiology in Ernakulam, Kerala.

Courses Offered

7 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

NAAC

EMEA College of Arts and Science, Kondotti is very popular for BSc Microbiology in Malappuram, Kerala.

Courses Offered

6 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

NAAC

Majlis Arts And Science College

Malappuram, Kerala Private 4.5

Majlis Arts And Science College is very popular for BSc Microbiology in Malappuram, Kerala.

Courses Offered

10 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

Pazhassi Raja College

Wayanad, Kerala Private 2.5

Pazhassi Raja College is very popular for BSc Microbiology in Wayanad, Kerala.

Courses Offered

8 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

SAFI Institute of Advanced Study

Malappuram, Kerala Private 3.3

SAFI Institute of Advanced Study is very popular for BSc Microbiology in Malappuram, Kerala.

Courses Offered

8 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

St.Thomas College

Kottayam, Kerala Private

St.Thomas College is very popular for BSc Microbiology in Kottayam, Kerala.

Courses Offered

8 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

Ma'din Arts and Science College

Malappuram, Kerala Private

Ma'din Arts and Science College is very popular for BSc Microbiology in Malappuram, Kerala.

Courses Offered

3 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

MET Arts and Science College

Kozhikode, Kerala Private 3.3

MET Arts and Science College is very popular for BSc Microbiology in Kozhikode, Kerala.

Courses Offered

5 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

Calicut University

Calicut, Kerala Public 3.0

Calicut University is very popular for BSc Microbiology in Calicut, Kerala.

Courses Offered

30 Courses

Exam Accepted

-/-

Tuition Fees Range

₹2 K-1.41 L

Accreditation

NAAC-A

# 38 NIRF

Kerala University

Thiruvananthapuram, Kerala Public 3.5 # 38 NIRF

Kerala University is very popular for BSc Microbiology in Thiruvananthapuram, Kerala.

Courses Offered

38 Courses

Exam Accepted

KEAM , KMAT

+1 NATA

Tuition Fees Range

₹540 -1.08 L

Accreditation

NAAC-A

GEMS Arts and Science College

Ramapuram, Kerala Private 3.9

GEMS Arts and Science College is very popular for BSc Microbiology in Ramapuram, Kerala.

Courses Offered

9 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

-/-

MG University (MGU)

Kottayam, Kerala Public 3.5

MG University (MGU) is very popular for BSc Microbiology in Kottayam, Kerala.

Courses Offered

22 Courses

Exam Accepted

CMAT , KEAM

Tuition Fees Range

-/-

Accreditation

NAAC , NAAC-A

ST.Berchmans Institute of Management Studies (BIMS Kerela) is very popular for BSc Microbiology in Kottayam, Kerala.

Courses Offered

14 Courses

Exam Accepted

-/-

Tuition Fees Range

-/-

Accreditation

NAAC

Amrita Vishwa Vidyapeetham Amritapuri Campus, [AVVAC] Kollam is very popular for BSc Microbiology in Kollam, Kerala.

Courses Offered

15 Courses

Exam Accepted

CAT

Tuition Fees Range

₹90 K-6.60 L

Accreditation

NAAC

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